5HLN

X-RAY CRYSTAL STRUCTURE OF GSK3B IN COMPLEX WITH CHIR99021


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP629814% (W/V) PEG 8000, 100 mM MES, pH 6.0 and 100 mM magnesium acetate
Crystal Properties
Matthews coefficientSolvent content
3.4864.65

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 163.521α = 90
b = 163.521β = 90
c = 84.93γ = 120
Symmetry
Space GroupP 65

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 3152010-08-19MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 24-ID-E1.075APS24-ID-E

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
13.139.280.99515.84.322259

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT3.139.2822259121099.270.17310.16970.236RANDOM101.706
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.11-0.05-0.110.36
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.646
r_dihedral_angle_3_deg20.148
r_dihedral_angle_4_deg19.037
r_mcangle_it10.4
r_dihedral_angle_1_deg7.447
r_mcbond_it7.104
r_mcbond_other7.102
r_angle_refined_deg1.714
r_angle_other_deg1.033
r_chiral_restr0.087
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.646
r_dihedral_angle_3_deg20.148
r_dihedral_angle_4_deg19.037
r_mcangle_it10.4
r_dihedral_angle_1_deg7.447
r_mcbond_it7.104
r_mcbond_other7.102
r_angle_refined_deg1.714
r_angle_other_deg1.033
r_chiral_restr0.087
r_bond_refined_d0.012
r_gen_planes_refined0.008
r_bond_other_d0.002
r_gen_planes_other0.002
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms5562
Nucleic Acid Atoms
Solvent Atoms
Heterogen Atoms90

Software

Software
Software NamePurpose
REFMACrefinement
PDB_EXTRACTdata extraction
SCALEPACKdata scaling