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Complex structure of Fab35 and human nAChR alpha1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 298 sodium cacodylate trihydrate, calcium acetate hydrate, PEG 8000
Crystal Properties Matthews coefficient Solvent content 2.56 52.02
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 160.006 α = 90 b = 42.143 β = 117.05 c = 136.488 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 300 mm CCD 2014-02-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 23-ID-B 1.0 APS 23-ID-B
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.25 50 94.8 0.117 0.127 0.093 6.1 3.5 36729
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.25 2.29 57.8 0.28 2.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.61 50.01 23958 1231 99.49 0.20959 0.20697 0.25995 0.2427 RANDOM 56.344
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 3.41 0.81 0.13 -2.87
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.988 r_dihedral_angle_3_deg 15.82 r_dihedral_angle_4_deg 14.222 r_dihedral_angle_1_deg 7.233 r_long_range_B_refined 3.732 r_long_range_B_other 3.714 r_mcangle_it 2.349 r_mcangle_other 2.349 r_scangle_other 1.859 r_angle_refined_deg 1.341
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.988 r_dihedral_angle_3_deg 15.82 r_dihedral_angle_4_deg 14.222 r_dihedral_angle_1_deg 7.233 r_long_range_B_refined 3.732 r_long_range_B_other 3.714 r_mcangle_it 2.349 r_mcangle_other 2.349 r_scangle_other 1.859 r_angle_refined_deg 1.341 r_mcbond_it 1.287 r_mcbond_other 1.287 r_scbond_it 1.02 r_scbond_other 1.02 r_angle_other_deg 0.909 r_chiral_restr 0.076 r_bond_refined_d 0.008 r_gen_planes_refined 0.004 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5577 Nucleic Acid Atoms Solvent Atoms 102 Heterogen Atoms 105
Software Software Software Name Purpose REFMAC refinement HKL-2000 data scaling PDB_EXTRACT data extraction HKL-2000 data reduction PHASER phasing