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Structure of Transferase mutant-C23S,C199S
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 EVAPORATION, RECRYSTALLIZATION 7.5 290 0.1M HEPES-NaOH (pH 7.5), 0.005M MnCl2, 0.1M sodium acetate, 24%(w/v) PEG 4000
Crystal Properties Matthews coefficient Solvent content 2.24 44.99
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 49.57 α = 90 b = 52.28 β = 90 c = 143.75 γ = 108
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2015-11-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PHOTON FACTORY BEAMLINE BL-5A 1 Photon Factory BL-5A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 50 94.4 9.2 2.6 94014
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.92 44.8 94014 4960 94.38 0.18621 0.18397 0.1918 0.228 0.233 RANDOM 28.101
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.557 r_dihedral_angle_4_deg 21.072 r_dihedral_angle_3_deg 13.817 r_long_range_B_refined 8.018 r_long_range_B_other 8.018 r_dihedral_angle_1_deg 7.045 r_scangle_other 5.477 r_mcangle_it 4.284 r_mcangle_other 4.284 r_scbond_other 3.546
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.557 r_dihedral_angle_4_deg 21.072 r_dihedral_angle_3_deg 13.817 r_long_range_B_refined 8.018 r_long_range_B_other 8.018 r_dihedral_angle_1_deg 7.045 r_scangle_other 5.477 r_mcangle_it 4.284 r_mcangle_other 4.284 r_scbond_other 3.546 r_scbond_it 3.545 r_mcbond_it 2.869 r_mcbond_other 2.865 r_angle_refined_deg 1.932 r_angle_other_deg 1.099 r_chiral_restr 0.121 r_bond_refined_d 0.018 r_gen_planes_refined 0.009 r_bond_other_d 0.006 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 9854 Nucleic Acid Atoms Solvent Atoms 751 Heterogen Atoms 162
Software Software Software Name Purpose REFMAC refinement iMOSFLM data reduction Aimless data scaling REFMAC phasing