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Mechanistic insights into the alternative translation termination by ArfA and RF2
Refinement RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.375 r_dihedral_angle_3_deg 18.906 r_dihedral_angle_4_deg 17.097 r_long_range_B_refined 15.867 r_long_range_B_other 15.867 r_mcangle_it 12.188 r_mcangle_other 12.188 r_dihedral_angle_1_deg 11.915 r_scangle_other 11.675 r_mcbond_it 7.985
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.375 r_dihedral_angle_3_deg 18.906 r_dihedral_angle_4_deg 17.097 r_long_range_B_refined 15.867 r_long_range_B_other 15.867 r_mcangle_it 12.188 r_mcangle_other 12.188 r_dihedral_angle_1_deg 11.915 r_scangle_other 11.675 r_mcbond_it 7.985 r_mcbond_other 7.984 r_scbond_it 7.723 r_scbond_other 7.723 r_angle_other_deg 1.266 r_angle_refined_deg 1.097 r_chiral_restr 0.071 r_bond_refined_d 0.006 r_gen_planes_refined 0.006 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Sample 70S-ArfA-RF2 complex Sample Components Rf2-ArfA rRNA
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 13693 Reported Resolution (Å) 3.01 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type FEI FALCON II (4k x 4k) Electron Dose (electrons/Å**2) 2
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) Maximum Defocus (nm) Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version IMAGE ACQUISITION AutoEMation II CTF CORRECTION CTFFIND 3 MODEL FITTING Coot RECONSTRUCTION RELION 1.3 MODEL REFINEMENT REFMAC
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details NONE