☰ Navigation Tabs
Crystal structure of Arginine-bound CASTOR1 from Homo sapiens
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 287 PEG 3350, Magnesium acetate tetrahydrate
Crystal Properties Matthews coefficient Solvent content 2.25 45.38
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 47.547 α = 90 b = 76.834 β = 96.21 c = 95.223 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2016-06-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRF BEAMLINE BL18U1 0.9785 SSRF BL18U1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.06 94.7 99.7 5.7 3.3 135965
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.06 94.66 31497 1678 78.98 0.1925 0.18998 0.1957 0.23828 0.2408 RANDOM 31.632
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.04 0.21 0.34 -0.42
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.669 r_dihedral_angle_4_deg 18.871 r_dihedral_angle_3_deg 18.738 r_long_range_B_refined 8.213 r_long_range_B_other 8.206 r_dihedral_angle_1_deg 7.581 r_scangle_other 5.798 r_mcangle_it 4.82 r_mcangle_other 4.819 r_scbond_it 3.704
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.669 r_dihedral_angle_4_deg 18.871 r_dihedral_angle_3_deg 18.738 r_long_range_B_refined 8.213 r_long_range_B_other 8.206 r_dihedral_angle_1_deg 7.581 r_scangle_other 5.798 r_mcangle_it 4.82 r_mcangle_other 4.819 r_scbond_it 3.704 r_scbond_other 3.704 r_mcbond_other 3.037 r_mcbond_it 3.036 r_angle_refined_deg 1.871 r_angle_other_deg 1.132 r_chiral_restr 0.12 r_bond_refined_d 0.017 r_gen_planes_refined 0.009 r_bond_other_d 0.003 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4793 Nucleic Acid Atoms Solvent Atoms 149 Heterogen Atoms 13
Software Software Software Name Purpose REFMAC refinement HKL-3000 data reduction SCALEPACK data scaling PHASER phasing