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MR structure of the binary mosquito larvicide BinAB at pH 5
Serial Crystallography (SX)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 5FOY PDB ENTRY 5FOY
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5 NATURALLY OCCURRING NANOCRYSTALS FORMED IN VIVO, pH 5
Crystal Properties Matthews coefficient Solvent content 3.05 59.4
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 86.787 α = 90 b = 96.996 β = 90 c = 127.075 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 287 PIXEL CORNELL-SLAC MIRRORS 2015-02-13 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 FREE ELECTRON LASER SLAC LCLS BEAMLINE CXI 1.459 SLAC LCLS CXI
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.5 45 99.9 0.868 6.34 76.62 5495157 2.45 28.41
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.5 2.54 99.6 0.28 2.46 8.61
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT PDB ENTRY 5FOY 2.5 24.643 36193 1813 95.86 0.2137 0.2111 0.2066 0.2624 0.2591 38.23
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 15.335 f_angle_d 0.448 f_chiral_restr 0.042 f_plane_restr 0.003 f_bond_d 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6322 Nucleic Acid Atoms Solvent Atoms 718 Heterogen Atoms
Software Software Software Name Purpose PHENIX refinement cctbx.xfel data reduction cctbx.prime data scaling PHASER phasing