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Structure of Rad14 in complex with acetylaminophenyl-guanine containing DNA
Crystallization Crystal Properties Matthews coefficient Solvent content 1.86 43
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 52.964 α = 90 b = 52.964 β = 90 c = 130.945 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 2016-02-05 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID30B 0.979 ESRF ID30B
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 49 100 0.16 6.62 6.8 18268
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.2 2.3 100 1.11 6.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.2 52.96 17370 894 99.9 0.21981 0.21753 0.2238 0.26552 0.2631 RANDOM 52.834
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.32 0.32 -0.64
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.541 r_dihedral_angle_3_deg 16.944 r_dihedral_angle_4_deg 16.388 r_dihedral_angle_1_deg 6.232 r_mcangle_it 2.302 r_angle_refined_deg 1.705 r_angle_other_deg 1.401 r_mcbond_it 1.377 r_mcbond_other 1.368 r_scbond_it 1.134
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.541 r_dihedral_angle_3_deg 16.944 r_dihedral_angle_4_deg 16.388 r_dihedral_angle_1_deg 6.232 r_mcangle_it 2.302 r_angle_refined_deg 1.705 r_angle_other_deg 1.401 r_mcbond_it 1.377 r_mcbond_other 1.368 r_scbond_it 1.134 r_chiral_restr 0.101 r_bond_refined_d 0.013 r_gen_planes_refined 0.009 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1885 Nucleic Acid Atoms 1148 Solvent Atoms 36 Heterogen Atoms 2
Software Software Software Name Purpose REFMAC refinement XDS data reduction