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CU(I)-CSP1 (COPPER STORAGE PROTEIN 1) FROM METHYLOSINUS TRICHOSPORIUM OB3B
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 0.03 M MGCL2, 0.03 M CACL2, 0.1 M TRIS PH 8.5, 12.5% V/V MPD (RACEMIC), 12.5% PEG 1000, 12.5% PEG 3350
Crystal Properties Matthews coefficient Solvent content 1.94 36
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 44.41 α = 90 b = 41.42 β = 92.96 c = 53.13 γ = 90
Symmetry Space Group P 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2013-08-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I24 Diamond I24
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 53.06 99.1 0.09 5.6 2.8 15212 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.9 1.95 97.1 0.43 2.1 2.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT NONE 1.9 53.06 14489 722 99.04 0.19988 0.19819 0.23166 0.2229 RANDOM 40.332
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.78 0.03 -1.38 -0.4
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_4_deg 35.572 r_dihedral_angle_2_deg 28.262 r_dihedral_angle_3_deg 15.999 r_dihedral_angle_1_deg 4.838 r_scbond_it 4.272 r_mcangle_it 4.078 r_mcbond_it 3.149 r_mcbond_other 3.099 r_angle_refined_deg 1.594 r_angle_other_deg 1.243
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_4_deg 35.572 r_dihedral_angle_2_deg 28.262 r_dihedral_angle_3_deg 15.999 r_dihedral_angle_1_deg 4.838 r_scbond_it 4.272 r_mcangle_it 4.078 r_mcbond_it 3.149 r_mcbond_other 3.099 r_angle_refined_deg 1.594 r_angle_other_deg 1.243 r_chiral_restr 0.089 r_bond_refined_d 0.016 r_gen_planes_refined 0.008 r_bond_other_d 0.006 r_gen_planes_other 0.004 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1556 Nucleic Acid Atoms Solvent Atoms 116 Heterogen Atoms 28
Software Software Software Name Purpose XDS data reduction Aimless data scaling SHELXCD phasing PHASER phasing REFMAC refinement