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HETEROYOHIMBINE SYNTHASE THAS1 FROM CATHARANTHUS ROSEUS - COMPLEX WITH NADP+
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6.5 293 NULL
Crystal Properties Matthews coefficient Solvent content 2.14 42.5
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 102.41 α = 90 b = 112.31 β = 90 c = 57.11 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2014-05-02 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I04 0.900 Diamond I04
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.05 40.04 99.7 0.059 0.02 0.999 15.4 8.8 304642 10.9
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.05 1.08 96.9 1.29 0.517 0.51 1.4 6.8 21788
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.05 40.04 289489 15153 99.73 0.124 0.123 0.1434 0.1541 RANDOM 17
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.16 0.4 -0.56
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.466 r_sphericity_free 27.2 r_dihedral_angle_4_deg 17.89 r_sphericity_bonded 11.893 r_dihedral_angle_3_deg 11.818 r_dihedral_angle_1_deg 6.228 r_mcangle_it 2.299 r_rigid_bond_restr 2.127 r_mcbond_it 1.81 r_mcbond_other 1.78
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.466 r_sphericity_free 27.2 r_dihedral_angle_4_deg 17.89 r_sphericity_bonded 11.893 r_dihedral_angle_3_deg 11.818 r_dihedral_angle_1_deg 6.228 r_mcangle_it 2.299 r_rigid_bond_restr 2.127 r_mcbond_it 1.81 r_mcbond_other 1.78 r_angle_refined_deg 1.643 r_angle_other_deg 1.366 r_chiral_restr 0.107 r_bond_refined_d 0.012 r_gen_planes_refined 0.009 r_bond_other_d 0.007 r_gen_planes_other 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5106 Nucleic Acid Atoms Solvent Atoms 955 Heterogen Atoms 156
Software Software Software Name Purpose Aimless data scaling REFMAC refinement PDB_EXTRACT data extraction SHELX phasing XDS data reduction