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SeMet regulator of nicotine degradation
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 287 1M Sodium malonate pH5.0, 0.1M Sodium acetate trihydrate pH4.5, 2%(w/v) polyethylene 20000
Crystal Properties Matthews coefficient Solvent content 2.99 63.82
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 150.011 α = 90 b = 150.011 β = 90 c = 156.689 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2014-06-14 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRF BEAMLINE BL17U 0.987 SSRF BL17U
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.65 50 100 36.96 12.1 52428
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.65 2.74 100 8.41 12.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.65 41.61 49682 2672 99.82 0.1995 0.19677 0.1989 0.25055 0.2492 RANDOM 40.615
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.32 -0.32 0.64
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.227 r_long_range_B_other 18.755 r_long_range_B_refined 18.748 r_dihedral_angle_4_deg 18.557 r_dihedral_angle_3_deg 17.834 r_scangle_other 15.503 r_mcangle_it 13.908 r_mcangle_other 13.907 r_scbond_it 12.625 r_scbond_other 12.625
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.227 r_long_range_B_other 18.755 r_long_range_B_refined 18.748 r_dihedral_angle_4_deg 18.557 r_dihedral_angle_3_deg 17.834 r_scangle_other 15.503 r_mcangle_it 13.908 r_mcangle_other 13.907 r_scbond_it 12.625 r_scbond_other 12.625 r_mcbond_it 11.267 r_mcbond_other 11.266 r_dihedral_angle_1_deg 6.224 r_angle_refined_deg 1.818 r_angle_other_deg 1.093 r_chiral_restr 0.106 r_bond_refined_d 0.015 r_gen_planes_refined 0.007 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 9940 Nucleic Acid Atoms Solvent Atoms 184 Heterogen Atoms 38
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling