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The structure of monooxygenase KstA11 in the biosynthetic pathway of kosinostatin
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7 289 DL-Malic acid, PEG 3350
Crystal Properties Matthews coefficient Solvent content 2.52 51.2
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 93.748 α = 90 b = 93.748 β = 90 c = 71.182 γ = 90
Symmetry Space Group P 4 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD 2014-09-26 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRF BEAMLINE BL17U 0.9791 SSRF BL17U
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.65 50 100 0.102 0.103 0.02 10 28.4 39067
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.65 1.68 100 0.217 0.915 28.7 1907
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.68 39.18 34902 1838 99.97 0.1312 0.1288 0.1435 0.1769 0.1915 RANDOM 26.589
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.71 0.71 -1.42
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.227 r_sphericity_free 25.45 r_dihedral_angle_4_deg 22.821 r_dihedral_angle_3_deg 14.566 r_sphericity_bonded 14.363 r_rigid_bond_restr 8.591 r_dihedral_angle_1_deg 6.338 r_angle_refined_deg 1.357 r_angle_other_deg 0.748 r_chiral_restr 0.105
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.227 r_sphericity_free 25.45 r_dihedral_angle_4_deg 22.821 r_dihedral_angle_3_deg 14.566 r_sphericity_bonded 14.363 r_rigid_bond_restr 8.591 r_dihedral_angle_1_deg 6.338 r_angle_refined_deg 1.357 r_angle_other_deg 0.748 r_chiral_restr 0.105 r_gen_planes_refined 0.013 r_bond_refined_d 0.011 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2168 Nucleic Acid Atoms Solvent Atoms 317 Heterogen Atoms 38
Software Software Software Name Purpose REFMAC refinement HKL-2000 data processing Coot model building PHENIX phasing