☰ Navigation Tabs
Crystal structure of the Arabidopsis thaliana C-terminal Chlh at 1.25A
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7 277 PEG, NaCl
Crystal Properties Matthews coefficient Solvent content 1.97 37.6
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 69.099 α = 90 b = 72.776 β = 109.76 c = 72.911 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2009-06-04 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PHOTON FACTORY BEAMLINE AR-NE3A 1 Photon Factory AR-NE3A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.25 50 89.8 45 5.9 187584 168362
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.25 50 159967 8308 89.79 0.16971 0.16895 0.18404 0.1872 RANDOM 19.411
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.2 0.85 1.04 -0.67
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.233 r_dihedral_angle_4_deg 16.331 r_dihedral_angle_3_deg 11.684 r_dihedral_angle_1_deg 5.363 r_scangle_it 3.378 r_scbond_it 2.183 r_mcangle_it 1.544 r_angle_refined_deg 1.154 r_rigid_bond_restr 0.919 r_mcbond_it 0.882
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.233 r_dihedral_angle_4_deg 16.331 r_dihedral_angle_3_deg 11.684 r_dihedral_angle_1_deg 5.363 r_scangle_it 3.378 r_scbond_it 2.183 r_mcangle_it 1.544 r_angle_refined_deg 1.154 r_rigid_bond_restr 0.919 r_mcbond_it 0.882 r_chiral_restr 0.081 r_bond_refined_d 0.007 r_gen_planes_refined 0.005 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5843 Nucleic Acid Atoms Solvent Atoms 1232 Heterogen Atoms 23
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling SHARP phasing