X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP2971.75 uL protein solution (9.9 mg/mL BaeKS5, 150 mM NaCl, 15 mM HEPES, pH 7.5) with 0.5 uL crystallization buffer (1.1 M LiSO4, 0.1 M Tris, pH 8.0)
Crystal Properties
Matthews coefficientSolvent content
3.8868.31

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 70.758α = 90
b = 319.132β = 110.26
c = 103.47γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100IMAGE PLATEMAR scanner 300 mm plate2014-07-02MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 23-ID-B1.0APS23-ID-B

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
14.297.0779.8814.23.223712

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT4.297.0723712127979.880.291120.288430.34088RANDOM196.373
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.270.020.210.04
RMS Deviations
KeyRefinement Restraint Deviation
r_long_range_B_other34.765
r_long_range_B_refined34.763
r_dihedral_angle_2_deg33.33
r_dihedral_angle_3_deg23.353
r_mcangle_it20.324
r_mcangle_other20.324
r_scangle_other17.811
r_dihedral_angle_4_deg17.587
r_mcbond_it12.266
r_mcbond_other12.266
RMS Deviations
KeyRefinement Restraint Deviation
r_long_range_B_other34.765
r_long_range_B_refined34.763
r_dihedral_angle_2_deg33.33
r_dihedral_angle_3_deg23.353
r_mcangle_it20.324
r_mcangle_other20.324
r_scangle_other17.811
r_dihedral_angle_4_deg17.587
r_mcbond_it12.266
r_mcbond_other12.266
r_scbond_it10.643
r_scbond_other10.642
r_dihedral_angle_1_deg8.289
r_angle_other_deg4.064
r_angle_refined_deg2.651
r_chiral_restr0.148
r_bond_refined_d0.013
r_gen_planes_refined0.008
r_gen_planes_other0.005
r_bond_other_d
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms18315
Nucleic Acid Atoms
Solvent Atoms
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling
PHASERphasing