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Crystal Structure of Truncated CCL21
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 293.15 Ammonium sulfate, MPD
Crystal Properties Matthews coefficient Solvent content 2.06 40.31
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 65.752 α = 90 b = 58.244 β = 119.94 c = 66.054 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD 2013-10-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 22-BM 1.0 APS 22-BM
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.903 57.24 99.9 16.54 7 34110
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.9 1.93 99.5 2.2 6.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.9 57.24 27663 1335 84.88 0.21267 0.21023 0.2172 0.26219 0.2627 RANDOM 23.489
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.24 -0.15 1 -0.35
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.524 r_dihedral_angle_3_deg 15.557 r_dihedral_angle_4_deg 14.336 r_dihedral_angle_1_deg 7.248 r_long_range_B_refined 6.121 r_long_range_B_other 6.103 r_scangle_other 3.888 r_mcangle_it 3.171 r_mcangle_other 3.171 r_scbond_other 2.427
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.524 r_dihedral_angle_3_deg 15.557 r_dihedral_angle_4_deg 14.336 r_dihedral_angle_1_deg 7.248 r_long_range_B_refined 6.121 r_long_range_B_other 6.103 r_scangle_other 3.888 r_mcangle_it 3.171 r_mcangle_other 3.171 r_scbond_other 2.427 r_scbond_it 2.425 r_mcbond_it 1.937 r_mcbond_other 1.936 r_angle_refined_deg 1.836 r_angle_other_deg 0.998 r_chiral_restr 0.11 r_bond_refined_d 0.016 r_gen_planes_refined 0.011 r_bond_other_d 0.005 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3427 Nucleic Acid Atoms Solvent Atoms 187 Heterogen Atoms 25
Software Software Software Name Purpose REFMAC refinement HKL-2000 data scaling SCALEPACK data scaling DENZO data reduction BALBES phasing MOLREP phasing