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Human HMT1 hnRNP methyltransferase-like protein 6 (S. cerevisiae)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 5.6 295 10% PEG 3350, 0.2M MgCl2, 0.1M Sodium Cacadylate, pH6.5
Crystal Properties Matthews coefficient Solvent content 2.68 54.15
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 100.244 α = 90 b = 100.244 β = 90 c = 89.868 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2015-07-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 24-ID-E 0.97921 APS 24-ID-E
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.55 50 99.3 0.171 0.198 0.116 6.5 3.2 28929
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.55 2.59 100 0.893 0.606 0.387 3.2 1436
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.55 50 28018 870 99.26 0.2213 0.2201 0.2209 0.2556 0.2518 RANDOM 25.338
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.62 0.62 -1.24
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.146 r_dihedral_angle_4_deg 14.136 r_dihedral_angle_3_deg 12.527 r_dihedral_angle_1_deg 5.528 r_mcangle_it 1.606 r_angle_refined_deg 1.182 r_mcbond_it 0.887 r_mcbond_other 0.887 r_angle_other_deg 0.854 r_chiral_restr 0.061
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.146 r_dihedral_angle_4_deg 14.136 r_dihedral_angle_3_deg 12.527 r_dihedral_angle_1_deg 5.528 r_mcangle_it 1.606 r_angle_refined_deg 1.182 r_mcbond_it 0.887 r_mcbond_other 0.887 r_angle_other_deg 0.854 r_chiral_restr 0.061 r_bond_refined_d 0.007 r_gen_planes_refined 0.004 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5062 Nucleic Acid Atoms Solvent Atoms 65 Heterogen Atoms 108
Software Software Software Name Purpose HKL-3000 data scaling REFMAC refinement PDB_EXTRACT data extraction PHASER phasing