X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP6.5277100-160 mM MgCl2 100mM MES 6.5 10-18% PEG3350
Crystal Properties
Matthews coefficientSolvent content
2.6253.04

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 59.51α = 90
b = 153.89β = 94.97
c = 61.59γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMAR CCD 165 mm2011-05-16MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONEMBL/DESY, HAMBURG BEAMLINE X130.8123EMBL/DESY, HAMBURGX13

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
122099.7225.77426774069

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT22070364370499.730.18980.188220.21995RANDOM40.694
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.22-0.871.1-1.16
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.735
r_dihedral_angle_4_deg16.527
r_dihedral_angle_3_deg13.663
r_dihedral_angle_1_deg6.064
r_long_range_B_refined5.914
r_long_range_B_other5.889
r_scangle_other3.825
r_mcangle_it2.701
r_mcangle_other2.701
r_scbond_it2.567
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.735
r_dihedral_angle_4_deg16.527
r_dihedral_angle_3_deg13.663
r_dihedral_angle_1_deg6.064
r_long_range_B_refined5.914
r_long_range_B_other5.889
r_scangle_other3.825
r_mcangle_it2.701
r_mcangle_other2.701
r_scbond_it2.567
r_scbond_other2.564
r_mcbond_it1.887
r_mcbond_other1.884
r_angle_refined_deg1.461
r_angle_other_deg1.232
r_chiral_restr0.089
r_bond_refined_d0.011
r_gen_planes_refined0.007
r_bond_other_d0.005
r_gen_planes_other0.005
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms7261
Nucleic Acid Atoms
Solvent Atoms409
Heterogen Atoms134

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
XSCALEdata scaling
PHASERphasing