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STRUCTURE OF THE B-DNA DECAMER C-C-A-A-C-G-T-T-G-G AND COMPARISON WITH ISOMORPHOUS DECAMERS C-C-A-A-G-A-T-T-G-G AND C-C-A-G-G-C-C-T-G-G
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION VAPOR DIFFUSION
Crystal Properties Matthews coefficient Solvent content 2.05 39.91
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 32.25 α = 90 b = 25.53 β = 113.4 c = 34.38 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 273 DIFFRACTOMETER RIGAKU AFC-5R M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.4 8 4402 1
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) Mean Isotropic B X-RAY DIFFRACTION 1.4 8 1 4402 0.16
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation n_phos_angle_it 4 n_sugar_angle_it 2.1 n_multtor_nbd 0.121 n_chiral_restr 0.098 n_singtor_nbd 0.074 n_phos_bond_angle_d 0.05 n_sugar_bond_angle_d 0.029 n_phos_bond_d 0.025 n_sugar_bond_d 0.021 n_plane_restr 0.02
RMS Deviations Key Refinement Restraint Deviation n_phos_angle_it 4 n_sugar_angle_it 2.1 n_multtor_nbd 0.121 n_chiral_restr 0.098 n_singtor_nbd 0.074 n_phos_bond_angle_d 0.05 n_sugar_bond_angle_d 0.029 n_phos_bond_d 0.025 n_sugar_bond_d 0.021 n_plane_restr 0.02 n_bond_d n_angle_d n_planar_d n_hb_or_metal_coord n_sugar_bond_it n_phos_bond_it n_bond_angle_restr n_dihedral_angle_restr n_impr_tor n_xhyhbond_nbd
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms Nucleic Acid Atoms 202 Solvent Atoms 77 Heterogen Atoms 4
Software Software Software Name Purpose NUCLSQ refinement