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Acetylcholinesterase Methylene Blue no PEG
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2W9I
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 277 46% PEG200 (v/v) in 100 mM NaCl/1 mM MES, pH 6.5
Crystal Properties Matthews coefficient Solvent content 3.98 69.11
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 111.059 α = 90 b = 111.059 β = 90 c = 137.172 γ = 120
Symmetry Space Group P 31 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL PSI PILATUS 6M 2012-11-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA 1.0000 SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.7 96.18 98.9 0.104 6.4 6.4 27016
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.7 2.85 0.643
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2W9I 2.7 96.18 25658 1356 98.54 0.19409 0.19254 0.2026 0.22378 0.2326 RANDOM 52.018
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.33 -0.16 -0.33 1.06
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.203 r_dihedral_angle_4_deg 14.873 r_dihedral_angle_3_deg 13.322 r_dihedral_angle_1_deg 5.89 r_long_range_B_other 4.692 r_long_range_B_refined 4.69 r_scangle_other 2.346 r_mcangle_other 1.935 r_mcangle_it 1.934 r_scbond_it 1.46
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.203 r_dihedral_angle_4_deg 14.873 r_dihedral_angle_3_deg 13.322 r_dihedral_angle_1_deg 5.89 r_long_range_B_other 4.692 r_long_range_B_refined 4.69 r_scangle_other 2.346 r_mcangle_other 1.935 r_mcangle_it 1.934 r_scbond_it 1.46 r_scbond_other 1.4 r_angle_refined_deg 1.201 r_mcbond_it 1.162 r_mcbond_other 1.157 r_angle_other_deg 0.731 r_chiral_restr 0.065 r_bond_refined_d 0.007 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4179 Nucleic Acid Atoms Solvent Atoms 15 Heterogen Atoms 194
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling PHASER phasing