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Crystal structure of an ankyrin repeat domain (ABAYE2397) from Acinetobacter baumannii AYE at 1.00 A resolution
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 293 0.2M sodium chloride, 20.0% polyethylene glycol 3350
Crystal Properties Matthews coefficient Solvent content 2.1 41.32
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 43.268 α = 83.85 b = 43.221 β = 89.96 c = 49.632 γ = 78.38
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 325 mm CCD Vertical focusing mirror; double crystal Si(111) monochromator 2014-12-09 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL14-1 0.9791 SSRL BL14-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Rrim I (All) Rpim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1 27.228 82.5 0.077 0.089 0.045 9.4 4 156154 156154
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Rrim I (All) Rpim I (All) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1 1.03 29.1 0.716 0.716 0.829 0.417 1 3.9 4081
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1 27.228 156092 7870 82.46 0.1404 0.139 0.168 0.19 RANDOM 12.2327
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.1 0.36 -0.11 0.5 -0.01 -0.28
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.637 r_sphericity_free 25.944 r_dihedral_angle_4_deg 18.544 r_dihedral_angle_3_deg 12.781 r_sphericity_bonded 7.456 r_dihedral_angle_1_deg 5.705 r_rigid_bond_restr 2.785 r_angle_refined_deg 1.67 r_mcangle_it 1.12 r_angle_other_deg 1.046
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.637 r_sphericity_free 25.944 r_dihedral_angle_4_deg 18.544 r_dihedral_angle_3_deg 12.781 r_sphericity_bonded 7.456 r_dihedral_angle_1_deg 5.705 r_rigid_bond_restr 2.785 r_angle_refined_deg 1.67 r_mcangle_it 1.12 r_angle_other_deg 1.046 r_mcbond_it 0.923 r_mcbond_other 0.922 r_chiral_restr 0.118 r_bond_refined_d 0.018 r_gen_planes_refined 0.009 r_bond_other_d 0.002 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2956 Nucleic Acid Atoms Solvent Atoms 732 Heterogen Atoms 6
Software Software Software Name Purpose PDB_EXTRACT data extraction MOSFLM data reduction SCALA data scaling SHELX phasing SHARP phasing REFMAC refinement SHELXD phasing