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the structure of candida albicans Sey1p in complex with GMPPNP
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 EVAPORATION 289 120 Mm DL-Malic acid pH 7.0, 16% w/v PEG 3350, 20 mM Bicine pH 9.0, 400 mM Magnesium chloride hexahydrate, 6% D-(+)-Trehalose dihydrate
Crystal Properties Matthews coefficient Solvent content 2.79 55.85
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 76.566 α = 90 b = 120.926 β = 90 c = 190.455 γ = 90
Symmetry Space Group I 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2013-12-26 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRF BEAMLINE BL17U 1.000 SSRF BL17U
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.8 50 99.5 27.2 6.9 19897
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.9 50 18876 1015 99.37 0.26156 0.2596 0.29806 0.2774 RANDOM 76.009
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 8.07 -3.53 -4.54
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.924 r_dihedral_angle_3_deg 23.264 r_dihedral_angle_4_deg 18.299 r_long_range_B_other 13.993 r_long_range_B_refined 13.991 r_mcangle_it 10.082 r_mcangle_other 10.08 r_scangle_other 9.07 r_dihedral_angle_1_deg 7.957 r_mcbond_other 6.244
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.924 r_dihedral_angle_3_deg 23.264 r_dihedral_angle_4_deg 18.299 r_long_range_B_other 13.993 r_long_range_B_refined 13.991 r_mcangle_it 10.082 r_mcangle_other 10.08 r_scangle_other 9.07 r_dihedral_angle_1_deg 7.957 r_mcbond_other 6.244 r_mcbond_it 6.243 r_scbond_other 5.365 r_scbond_it 5.363 r_angle_refined_deg 1.639 r_angle_other_deg 0.968 r_chiral_restr 0.098 r_bond_refined_d 0.013 r_bond_other_d 0.006 r_gen_planes_refined 0.005 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5303 Nucleic Acid Atoms Solvent Atoms 21 Heterogen Atoms 33
Software Software Software Name Purpose REFMAC refinement HKL-2000 data processing Coot model building