X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP5.52932.8-3.3 M sodium chloride, 0.1 M Bis-Tris pH 5.5
Crystal Properties
Matthews coefficientSolvent content
2.6353.17

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 213.54α = 90
b = 122.83β = 90.72
c = 51.57γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS 2M2013-10-10MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONDIAMOND BEAMLINE I04-10.920DiamondI04-1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.640.397.23.72.83971842.5
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.62.7495.50.72.6

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT2.640.337935168093.750.209230.207750.24212RANDOM39.514
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-10.28-3.56-12.9423.22
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.897
r_dihedral_angle_4_deg20.715
r_dihedral_angle_3_deg16.666
r_long_range_B_refined10.929
r_long_range_B_other10.929
r_dihedral_angle_1_deg6.886
r_mcangle_other6.681
r_mcangle_it6.68
r_scangle_other6.29
r_mcbond_it4.368
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.897
r_dihedral_angle_4_deg20.715
r_dihedral_angle_3_deg16.666
r_long_range_B_refined10.929
r_long_range_B_other10.929
r_dihedral_angle_1_deg6.886
r_mcangle_other6.681
r_mcangle_it6.68
r_scangle_other6.29
r_mcbond_it4.368
r_mcbond_other4.36
r_scbond_it4.148
r_scbond_other4.148
r_angle_refined_deg1.847
r_angle_other_deg1.616
r_chiral_restr0.105
r_bond_refined_d0.018
r_gen_planes_refined0.012
r_bond_other_d0.009
r_gen_planes_other0.009
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms6688
Nucleic Acid Atoms
Solvent Atoms130
Heterogen Atoms11

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
SCALAdata scaling
PHASERphasing