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Structure of CYP119 with T213A and C317H mutations
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.25 298 0.1 M Tris-HCl, 5 % PEG 4000
Crystal Properties Matthews coefficient Solvent content 2.39 48.45
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 64.486 α = 90 b = 137.871 β = 101.18 c = 91.779 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL PSI PILATUS 6M 2014-07-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL12-2 0.9795 SSRL BL12-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.7 50 98.5 10.7 3.3 40139
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.7 97.6 1.6 3.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.7 50 40139 2146 97.8 0.24038 0.23849 0.2374 0.27673 0.2751 RANDOM 64.526
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.8 -0.15 -0.12 0.91
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.032 r_dihedral_angle_4_deg 15.265 r_dihedral_angle_3_deg 14.134 r_dihedral_angle_1_deg 4.557 r_long_range_B_refined 2.283 r_long_range_B_other 2.283 r_mcangle_it 1.036 r_mcangle_other 1.036 r_angle_refined_deg 0.852 r_scangle_other 0.801
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.032 r_dihedral_angle_4_deg 15.265 r_dihedral_angle_3_deg 14.134 r_dihedral_angle_1_deg 4.557 r_long_range_B_refined 2.283 r_long_range_B_other 2.283 r_mcangle_it 1.036 r_mcangle_other 1.036 r_angle_refined_deg 0.852 r_scangle_other 0.801 r_angle_other_deg 0.643 r_mcbond_it 0.554 r_mcbond_other 0.554 r_scbond_it 0.47 r_scbond_other 0.47 r_chiral_restr 0.046 r_bond_refined_d 0.003 r_gen_planes_refined 0.003 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 9806 Nucleic Acid Atoms Solvent Atoms 11 Heterogen Atoms 10
Software Software Software Name Purpose REFMAC refinement XDS data reduction Aimless data scaling PHASER phasing