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Structure of the La Crosse Bunyavirus polymerase in complex with the 3' and 5' viral RNA
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7 0.1M HEPES PH 7, 0.2M SODIUM CITRATE DIHYDRATE, 0.3M AMMONIUM SULPHATE, 15% PEG 3350
Crystal Properties Matthews coefficient Solvent content 2.9 62
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 103 α = 90 b = 141.1 β = 90 c = 165.5 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 77 PIXEL DECTRIS PILATUS 6M 2014-09-04 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID23-1 ESRF ID23-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3 50 99.5 0.01 11.91 4.32 48549 3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3 3.12 99.5 0.08 1.55 4.52
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 3 49.17 46142 2407 99.05 0.19516 0.19228 0.1938 0.25242 0.2526 RANDOM 89.461
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.05 0.07 -0.02
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.725 r_dihedral_angle_3_deg 15.089 r_dihedral_angle_4_deg 12.96 r_dihedral_angle_1_deg 6.211 r_mcangle_it 5.558 r_mcbond_it 3.371 r_mcbond_other 3.371 r_scbond_it 3.188 r_angle_refined_deg 1.148 r_angle_other_deg 0.946
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.725 r_dihedral_angle_3_deg 15.089 r_dihedral_angle_4_deg 12.96 r_dihedral_angle_1_deg 6.211 r_mcangle_it 5.558 r_mcbond_it 3.371 r_mcbond_other 3.371 r_scbond_it 3.188 r_angle_refined_deg 1.148 r_angle_other_deg 0.946 r_chiral_restr 0.067 r_bond_refined_d 0.007 r_gen_planes_refined 0.004 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 13618 Nucleic Acid Atoms 716 Solvent Atoms Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling PHASER phasing