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Structure of Bacteriorhodopsin obtained from 20um crystals by multi crystal data collection
Crystallization Crystal Properties Matthews coefficient Solvent content 2.22 44.56
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 61.127 α = 90 b = 61.127 β = 90 c = 110.313 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID29 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.29 20.05 92.7 0.03 4.8 9802 2.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT NONE 2.29 20.01 9318 480 92.89 0.23188 0.23151 0.2111 0.23924 0.2138 RANDOM 35.438
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -9.57 -9.57 19.13
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.166 r_dihedral_angle_4_deg 25.189 r_dihedral_angle_3_deg 16.523 r_dihedral_angle_1_deg 5.706 r_mcangle_it 3.225 r_scbond_it 2.436 r_mcbond_it 2.139 r_mcbond_other 2.136 r_angle_refined_deg 1.599 r_angle_other_deg 1.149
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.166 r_dihedral_angle_4_deg 25.189 r_dihedral_angle_3_deg 16.523 r_dihedral_angle_1_deg 5.706 r_mcangle_it 3.225 r_scbond_it 2.436 r_mcbond_it 2.139 r_mcbond_other 2.136 r_angle_refined_deg 1.599 r_angle_other_deg 1.149 r_chiral_restr 0.086 r_bond_refined_d 0.012 r_bond_other_d 0.008 r_gen_planes_refined 0.008 r_gen_planes_other 0.007 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1612 Nucleic Acid Atoms Solvent Atoms 10 Heterogen Atoms 95
Software Software Software Name Purpose REFMAC refinement