5A3G
Structure of herpesvirus nuclear egress complex subunit M50
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 15N TROSY | 93% H2O/7% D2O, M50 230 UMOL/L | 175.0 | 6.5 | 1.0 atm | 291.15 | ||
| 2 | TROSY HNCA | 93% H2O/7% D2O, M50 230 UMOL/L | 175.0 | 6.5 | 1.0 atm | 291.15 | ||
| 3 | TROSY HNCACB | 93% H2O/7% D2O, M50 230 UMOL/L | 175.0 | 6.5 | 1.0 atm | 291.15 | ||
| 4 | TROSY HNCACO | 93% H2O/7% D2O, M50 230 UMOL/L | 175.0 | 6.5 | 1.0 atm | 291.15 | ||
| 5 | TROSY HNCO | 93% H2O/7% D2O, M50 230 UMOL/L | 175.0 | 6.5 | 1.0 atm | 291.15 | ||
| 6 | TROSY HNCOCA | 93% H2O/7% D2O, M50 230 UMOL/L | 175.0 | 6.5 | 1.0 atm | 291.15 | ||
| 7 | RDC_HNCO | 93% H2O/7% D2O, M50 230 UMOL/L | 175.0 | 6.5 | 1.0 atm | 291.15 | ||
| 8 | 15N NOESYHSQC | 93% H2O/7% D2O, M50 230 UMOL/L | 175.0 | 6.5 | 1.0 atm | 291.15 | ||
| 9 | 13C HSQC | 93% H2O/7% D2O, M50 230 UMOL/L | 175.0 | 6.5 | 1.0 atm | 291.15 | ||
| 10 | 13C NOESYHSQC | 93% H2O/7% D2O, M50 230 UMOL/L | 175.0 | 6.5 | 1.0 atm | 291.15 | ||
| 11 | CCONH | 93% H2O/7% D2O, M50 230 UMOL/L | 175.0 | 6.5 | 1.0 atm | 291.15 | ||
| 12 | HCCH-TOCSY | 93% H2O/7% D2O, M50 230 UMOL/L | 175.0 | 6.5 | 1.0 atm | 291.15 | ||
| 13 | HCCONH | 93% H2O/7% D2O, M50 230 UMOL/L | 175.0 | 6.5 | 1.0 atm | 291.15 | ||
| 14 | 13C ILV_NOESY | 93% H2O/7% D2O, M50 230 UMOL/L | ||||||
| 15 | 15N ILV_ NOESY | 93% H2O/7% D2O, M50 230 UMOL/L | ||||||
| 16 | 13C ILV_HSQC | 93% H2O/7% D2O, M50 230 UMOL/L | ||||||
| 17 | 4D 13C HMQC- NOESY-HMQC | 93% H2O/7% D2O, M50 230 UMOL/L | ||||||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE | 750 |
| 2 | Varian | INOVA | 600 |
| 3 | 900 | ||
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| SIMULATED ANNEALING WITH TORSION ANGLE DYNAMICS SIMULATION FOLLOWED BY RDC AND WATERBOX REFINEMENT | REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE. | Amber |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | LOWEST ENERGY |
| Conformers Calculated Total Number | 50 |
| Conformers Submitted Total Number | 15 |
| Representative Model | 1 (n/a) |
| Additional NMR Experimental Information | |
|---|---|
| Details | THE STRUCTURE WAS DETERMINED USING TRIPLE RESONANCE AND NOESY-BASED NMR EXPERIMENTS ON 13C,15N-LABELED M50 ( RESIDUES 1-168). |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | refinement | Amber | CASE, CHEATHAM, MERZ, ROITBERG, SIMMERLING, LUO, WANG, WALKER, | |
| 2 | structure solution | CYANA | 3.0 | |
| 3 | structure solution | NMRDraw | 11 | |
| 4 | structure solution | TALOS+ | 1.2009.0605.17 | |
| 5 | structure solution | CcpNmr Analysis | 2.4 | |
| 6 | structure solution | NMRPipe | 11 | |
| 7 | structure solution | hmsIST | 2.11 | |
| 8 | structure solution | CARA | 1.8.4 | |
