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Crystal structure of mtPAP in complex with CTP
Crystallization Crystal Properties Matthews coefficient Solvent content 2.22 44.61
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 61.064 α = 90 b = 95.575 β = 90 c = 191.613 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 287 CCD MARMOSAIC 225 mm CCD M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON BESSY BEAMLINE 14.3 BESSY 14.3
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.1 40 99.9 0.16 0.99 11.3 8.2 21101 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3.1 3.27 100 1.16 0.52 1.4 6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 3.1 38.29 19971 1080 99.81 0.21462 0.21219 0.2186 0.25965 0.2589 RANDOM 77.393
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 3.17 -1.27 -1.9
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.62 r_dihedral_angle_3_deg 15.63 r_dihedral_angle_4_deg 12.954 r_dihedral_angle_1_deg 5.179 r_mcangle_it 5.021 r_mcbond_it 2.982 r_mcbond_other 2.982 r_scbond_it 2.859 r_angle_refined_deg 1.049 r_angle_other_deg 0.822
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.62 r_dihedral_angle_3_deg 15.63 r_dihedral_angle_4_deg 12.954 r_dihedral_angle_1_deg 5.179 r_mcangle_it 5.021 r_mcbond_it 2.982 r_mcbond_other 2.982 r_scbond_it 2.859 r_angle_refined_deg 1.049 r_angle_other_deg 0.822 r_chiral_restr 0.055 r_bond_refined_d 0.006 r_gen_planes_refined 0.004 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7440 Nucleic Acid Atoms Solvent Atoms 4 Heterogen Atoms 60
Software Software Software Name Purpose REFMAC refinement MOLREP phasing