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Crystal structure of BBA68 or BbCRASP-1 from Borrelia burgdorferi strain B31
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1W33 PDB ENTRY 1W33
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8 10% PEG 10 000 0.1M TRIS PH 8.0
Crystal Properties Matthews coefficient Solvent content 2.9 58
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 54.63 α = 90 b = 54.63 β = 90 c = 394.28 γ = 90
Symmetry Space Group P 41 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD RH-COATED TOROIDAL SI MIRROR M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON MAX II BEAMLINE I911-3 MAX II I911-3
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.3 56.33 96.9 0.04 9.9 4.2 9488 2.4
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3.3 3.48 98.5 0.16 3.3 4.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1W33 3.3 50.45 8961 441 94.74 0.24795 0.24602 0.2529 0.28643 0.2815 RANDOM 101.414
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.44 0.44 -0.87
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.281 r_dihedral_angle_3_deg 19.447 r_long_range_B_refined 15.819 r_long_range_B_other 15.819 r_dihedral_angle_4_deg 12.008 r_scangle_other 10.781 r_mcangle_it 9.937 r_mcangle_other 9.935 r_scbond_it 6.677 r_scbond_other 6.675
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.281 r_dihedral_angle_3_deg 19.447 r_long_range_B_refined 15.819 r_long_range_B_other 15.819 r_dihedral_angle_4_deg 12.008 r_scangle_other 10.781 r_mcangle_it 9.937 r_mcangle_other 9.935 r_scbond_it 6.677 r_scbond_other 6.675 r_mcbond_it 6.413 r_mcbond_other 6.413 r_dihedral_angle_1_deg 6.247 r_angle_refined_deg 1.998 r_angle_other_deg 1.046 r_chiral_restr 0.173 r_bond_refined_d 0.013 r_gen_planes_refined 0.007 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2973 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling PHASER phasing