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mammalian 80S HCV-IRES initiation complex with eIF5B POST-like state
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 4CXC
Sample HCV-IRES 80S INITIATION COMPLEX WITH EIF5B POST- LIKE STATE
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK I Cryogen Name ETHANE Sample Vitrification Details VITRIFICATION 1 -- CRYOGEN- ETHANE, HUMIDITY- 100, TEMPERATURE- 93, INSTRUMENT- FEI VITROBOT MARK I, METHOD- BLOT FOR 2-4 SECONDS BEFORE PLUNGING,
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 541570 Reported Resolution (Å) 9.5 Resolution Method Other Details SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD-2683. (DEPOSITION ID: 12564). Refinement Type Symmetry Type POINT Point Symmetry C1
Map-Model Fitting and Refinement Id 1 (4CXC) Refinement Space REAL Refinement Protocol RIGID BODY FIT Refinement Target Overall B Value Fitting Procedure Details METHOD--RIGID BODY
Data Acquisition Detector Type TVIPS TEMCAM-F416 (4k x 4k) Electron Dose (electrons/Å**2) 20
Imaging Experiment 1 Date of Experiment 2012-12-22 Temperature (Kelvin) Microscope Model FEI TECNAI F30 Minimum Defocus (nm) 2000 Maximum Defocus (nm) 4500 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2 Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification 115000 Calibrated Magnification 194805 Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details AUTOMATED DATA COLLECTION USING LEGINON
EM Software Task Software Package Version RECONSTRUCTION SPARX RECONSTRUCTION SPIDER
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details CTFFIND3