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Crystal Structure of human MLH1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7.5 293 20% PEG4000, 10% ISOPROPANOL, 0.1 M HEPES
Crystal Properties Matthews coefficient Solvent content 2.87 57.08
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 94.568 α = 90 b = 94.568 β = 90 c = 85.825 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2010-04-14 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.9793 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 47.28 99.9 0.059 0.02 27.1 9.5 19468
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.3 2.38 100 1.113 0.382 2.3 9.5 1888
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.3 40 19437 981 99.9 0.2051 0.2026 0.2079 0.2537 0.256 RANDOM 65.1682
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.74 0.37 0.74 -2.4
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.591 r_dihedral_angle_4_deg 24.898 r_dihedral_angle_3_deg 13.307 r_dihedral_angle_1_deg 6.534 r_mcangle_it 4.141 r_mcbond_it 2.991 r_mcbond_other 2.983 r_angle_refined_deg 1.414 r_angle_other_deg 0.8 r_chiral_restr 0.079
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.591 r_dihedral_angle_4_deg 24.898 r_dihedral_angle_3_deg 13.307 r_dihedral_angle_1_deg 6.534 r_mcangle_it 4.141 r_mcbond_it 2.991 r_mcbond_other 2.983 r_angle_refined_deg 1.414 r_angle_other_deg 0.8 r_chiral_restr 0.079 r_bond_refined_d 0.014 r_gen_planes_refined 0.006 r_bond_other_d 0.002 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2195 Nucleic Acid Atoms Solvent Atoms 37 Heterogen Atoms 37
Software Software Software Name Purpose REFMAC refinement Aimless data scaling BUSTER refinement XDS data reduction PDB_EXTRACT data extraction