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Crystal structure of the Csy4-crRNA product complex
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2XLK PDB ENTRY 2XLK
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5 22 % PEG4000, 120 MM SODIUM CITRATE PH 5.0, 50 MM MGCL2
Crystal Properties Matthews coefficient Solvent content 2.14 47.17
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 60.79 α = 90 b = 47.8 β = 109.69 c = 86.57 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2010-09-23 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.3.1 ALS 8.3.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 81.51 99.7 0.09 15.58 6.5 15945 2 23.89
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.05 99 0.81 2.06 5.2
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT PDB ENTRY 2XLK 2 81.508 2 15934 797 99.69 0.1857 0.1829 0.1816 0.2382 0.2303 33.8
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.4691 4.8929 0.6628 -3.1319
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 13.504 f_angle_d 1.328 f_chiral_restr 0.119 f_bond_d 0.012 f_plane_restr 0.007
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1455 Nucleic Acid Atoms 348 Solvent Atoms 128 Heterogen Atoms 6
Software Software Software Name Purpose PHENIX refinement XDS data reduction XDS data scaling PHASER phasing