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Ebola virus nucleoprotein bound to VP35 chaperoning peptide P22121
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 5 277 12% PEG 6000, 100 mM MES pH 5.0
Crystal Properties Matthews coefficient Solvent content 2.43 49.44
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 33.349 α = 90 b = 92.398 β = 90 c = 133.626 γ = 90
Symmetry Space Group P 2 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS3 6M 1000 um thick sensor 2014-03-26 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 23-ID-D 1.0332 APS 23-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.8 46.2 99.7 0.084 0.036 0.999 12.9 6.3 10825 79.5
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.8 2.95 98.4 1.042 0.449 0.811 1.6 6.2 1486
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.8 45 9707 1078 99.65 0.2625 0.2592 0.2573 0.2933 0.2918 RANDOM 90.816
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -4.42 8.12 -3.7
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.701 r_dihedral_angle_3_deg 15.59 r_dihedral_angle_4_deg 12.3 r_mcangle_it 4.747 r_mcbond_it 4.144 r_angle_other_deg 4.096 r_mcbond_other 3.921 r_dihedral_angle_1_deg 1.714 r_angle_refined_deg 1.593 r_chiral_restr 0.084
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.701 r_dihedral_angle_3_deg 15.59 r_dihedral_angle_4_deg 12.3 r_mcangle_it 4.747 r_mcbond_it 4.144 r_angle_other_deg 4.096 r_mcbond_other 3.921 r_dihedral_angle_1_deg 1.714 r_angle_refined_deg 1.593 r_chiral_restr 0.084 r_bond_refined_d 0.012 r_gen_planes_other 0.006 r_gen_planes_refined 0.005 r_bond_other_d
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2640 Nucleic Acid Atoms Solvent Atoms 17 Heterogen Atoms
Software Software Software Name Purpose MOSFLM data reduction XDS data scaling PHASER phasing REFMAC refinement PDB_EXTRACT data extraction XDS data reduction