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Ebola virus nucleoprotein bound to VP35 chaperoning peptide I212121
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 4.7 277 2.2M Sodium formate, 100mM NaOAc pH 4.7
Crystal Properties Matthews coefficient Solvent content 2.91 57.8
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 91.21 α = 90 b = 93.14 β = 90 c = 114.94 γ = 90
Symmetry Space Group I 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 1000 um thick sensor 2014-11-21 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 23-ID-D 1.70004 APS 23-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 100 100 0.144 0.145 27.52 172.7 19509 -3 67.259
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.2 2.26 100 4.966 5.013 1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.4 72.36 18533 976 99.94 0.205 0.2035 0.2334 0.2284 RANDOM 79.841
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 3.95 -3.14 -0.82
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.843 r_dihedral_angle_4_deg 18.753 r_dihedral_angle_3_deg 15.448 r_mcangle_it 5.271 r_mcbond_it 4.481 r_mcbond_other 4.278 r_angle_other_deg 3.969 r_dihedral_angle_1_deg 2.656 r_angle_refined_deg 1.566 r_chiral_restr 0.095
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.843 r_dihedral_angle_4_deg 18.753 r_dihedral_angle_3_deg 15.448 r_mcangle_it 5.271 r_mcbond_it 4.481 r_mcbond_other 4.278 r_angle_other_deg 3.969 r_dihedral_angle_1_deg 2.656 r_angle_refined_deg 1.566 r_chiral_restr 0.095 r_bond_refined_d 0.013 r_gen_planes_other 0.009 r_gen_planes_refined 0.007 r_bond_other_d
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2674 Nucleic Acid Atoms Solvent Atoms 107 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement XSCALE data scaling PHENIX phasing PDB_EXTRACT data extraction XDS data reduction