X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP5.12890.2 M ammonium citrate dibasic, 20% w/v polyethylene glycol 3350, pH 5.1
Crystal Properties
Matthews coefficientSolvent content
2.9758.59

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 66.701α = 90
b = 66.701β = 90
c = 80.492γ = 120
Symmetry
Space GroupP 32

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray80CCDMARMOSAIC 300 mm CCD2014-04-06MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 21-ID-G0.97856APS21-ID-G

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.73010041.45.744089

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT1.73041930212499.870.166320.16480.19667RANDOM30.709
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.10.050.1-0.31
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.508
r_dihedral_angle_4_deg18.844
r_dihedral_angle_3_deg14.864
r_long_range_B_refined9.013
r_long_range_B_other8.629
r_scangle_other6.953
r_dihedral_angle_1_deg6.143
r_scbond_it4.752
r_scbond_other4.75
r_mcangle_it4.107
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.508
r_dihedral_angle_4_deg18.844
r_dihedral_angle_3_deg14.864
r_long_range_B_refined9.013
r_long_range_B_other8.629
r_scangle_other6.953
r_dihedral_angle_1_deg6.143
r_scbond_it4.752
r_scbond_other4.75
r_mcangle_it4.107
r_mcangle_other4.107
r_mcbond_it2.88
r_mcbond_other2.867
r_angle_refined_deg2.205
r_angle_other_deg0.972
r_chiral_restr0.138
r_bond_refined_d0.024
r_gen_planes_refined0.01
r_bond_other_d0.001
r_gen_planes_other0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2364
Nucleic Acid Atoms
Solvent Atoms386
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling
RESOLVEphasing