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Structure of FL autorepression promoter complex
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 3DNV PDB entry 3DNV
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 298 sodium formate
Crystal Properties Matthews coefficient Solvent content 5.29 76.75
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 228.2 α = 90 b = 228.2 β = 90 c = 130.8 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2013-09-23 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.3.1 1 ALS 8.3.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.77 161.4 63.6 4 4 34997
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB entry 3DNV 3.77 161.4 34997 2915 93.6 0.3837 0.3851 0.3785 0.381 180.4669
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -64.878 -64.878 129.757
RMS Deviations Key Refinement Restraint Deviation c_scangle_it 6.265 c_mcangle_it 5.725 c_mcbond_it 3.838 c_scbond_it 3.766 c_angle_d 1.406 c_bond_d 0.013
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8763 Nucleic Acid Atoms 2045 Solvent Atoms Heterogen Atoms
Software Software Software Name Purpose PDB_EXTRACT data extraction MOSFLM data reduction SCALA data scaling CNS phasing CNS refinement