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Re-refinement the crystal structure of Dscam1 isoform 1.34, N-terminal four Ig domains
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 1.5 M AMMONIUM SULPHATE, 0.1 M HEPES PH 7.5
Crystal Properties Matthews coefficient Solvent content 4.7 73.84
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 99.172 α = 90 b = 99.172 β = 90 c = 163.991 γ = 90
Symmetry Space Group P 42 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION FREE R-VALUE 1.948 19.834 1.34 59545 3003 98.58 0.2047 0.2031 0.2046 0.2332 0.234
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 13.787 f_angle_d 1.66 f_chiral_restr 0.094 f_bond_d 0.018 f_plane_restr 0.008
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3014 Nucleic Acid Atoms Solvent Atoms 383 Heterogen Atoms 136
Software Software Software Name Purpose PHENIX refinement DENZO data reduction SCALEPACK data scaling PHASER phasing