☰ Navigation Tabs
Structure of human ALDH1A1 with inhibitor CM037
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 EVAPORATION 7 298 PEG3350, sodium chloride, 100mM Bis Tris Buffer, ytterbium chloride, sitting drop
Crystal Properties Matthews coefficient Solvent content 2.24 45.12
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 108.89 α = 90 b = 108.89 β = 90 c = 83.009 γ = 90
Symmetry Space Group P 4 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL PSI PILATUS 6M 2014-11-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 23-ID-D 0.98 APS 23-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.85 50 99 0.058 27.4 8.5 40517
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.85 1.88 100 0.7 3.3 8.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.85 50 40517 2138 98.57 0.20356 0.20202 0.2081 0.23261 0.2314 RANDOM 43.806
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.12 0.12 -0.25
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.941 r_dihedral_angle_4_deg 16.497 r_dihedral_angle_3_deg 13.403 r_dihedral_angle_1_deg 6.057 r_long_range_B_refined 5.126 r_long_range_B_other 5.125 r_scangle_other 2.175 r_scbond_it 2.061 r_scbond_other 2.061 r_mcangle_it 1.409
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.941 r_dihedral_angle_4_deg 16.497 r_dihedral_angle_3_deg 13.403 r_dihedral_angle_1_deg 6.057 r_long_range_B_refined 5.126 r_long_range_B_other 5.125 r_scangle_other 2.175 r_scbond_it 2.061 r_scbond_other 2.061 r_mcangle_it 1.409 r_mcangle_other 1.409 r_angle_refined_deg 1.356 r_mcbond_it 0.939 r_mcbond_other 0.939 r_angle_other_deg 0.757 r_chiral_restr 0.072 r_bond_refined_d 0.012 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3799 Nucleic Acid Atoms Solvent Atoms 184 Heterogen Atoms 80
Software Software Software Name Purpose REFMAC refinement HKL-3000 data scaling