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Crystal structure of binary complex Gon7-Pcc1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 293 0.1 M Sodium Acetate pH 6.5, 20% PEG1500, 20% Glycerol, 3% Methanol
Crystal Properties Matthews coefficient Solvent content 2.4 48.77
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 80.73 α = 90 b = 104.39 β = 111.55 c = 89.89 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL PSI PILATUS 6M 2013-05-24 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SOLEIL BEAMLINE PROXIMA 2 0.9801 SOLEIL PROXIMA 2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.44 44.28 99.11 14.69 3.69 94329 25516
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.443 2.53 94.59
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.44 44.28 24239 1276 99.09 0.22677 0.22452 0.226 0.26991 0.275 RANDOM 64.221
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.14 -1.4 2.28 -0.79
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.379 r_dihedral_angle_3_deg 16.289 r_dihedral_angle_4_deg 13.14 r_long_range_B_other 7.914 r_long_range_B_refined 7.913 r_scangle_other 6.27 r_dihedral_angle_1_deg 6.2 r_mcangle_it 5.182 r_mcangle_other 5.181 r_scbond_it 4.409
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.379 r_dihedral_angle_3_deg 16.289 r_dihedral_angle_4_deg 13.14 r_long_range_B_other 7.914 r_long_range_B_refined 7.913 r_scangle_other 6.27 r_dihedral_angle_1_deg 6.2 r_mcangle_it 5.182 r_mcangle_other 5.181 r_scbond_it 4.409 r_scbond_other 4.409 r_mcbond_it 3.499 r_mcbond_other 3.455 r_angle_refined_deg 1.711 r_angle_other_deg 0.865 r_chiral_restr 0.086 r_gen_planes_refined 0.02 r_gen_planes_other 0.017 r_bond_refined_d 0.016 r_bond_other_d 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3180 Nucleic Acid Atoms Solvent Atoms 14 Heterogen Atoms 10
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling