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Crystal structure of binary complex Gon7-Pcc1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 293 0.1 M Sodium Acetate pH 6.5, 20% PEG1500, 20% Glycerol, 3% Methanol
Crystal Properties Matthews coefficient Solvent content 2.28 46
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 79.1 α = 90 b = 102.5 β = 111.8 c = 88.8 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL PSI PILATUS 6M 2013-07-02 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SOLEIL BEAMLINE PROXIMA 1 0.97895 SOLEIL PROXIMA 1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.99 43.53 99.54 8.08 3.83 13327
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.992 3.099 97.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.99 43.53 12660 667 99.51 0.25377 0.25079 0.2533 0.30816 0.307 RANDOM 66.138
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.43 -1.51 -0.44 1.57
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.634 r_dihedral_angle_4_deg 22.714 r_dihedral_angle_3_deg 17.271 r_dihedral_angle_1_deg 5.859 r_long_range_B_refined 5.608 r_long_range_B_other 5.608 r_scangle_other 4.746 r_mcangle_it 4.134 r_mcangle_other 4.133 r_scbond_it 3.482
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.634 r_dihedral_angle_4_deg 22.714 r_dihedral_angle_3_deg 17.271 r_dihedral_angle_1_deg 5.859 r_long_range_B_refined 5.608 r_long_range_B_other 5.608 r_scangle_other 4.746 r_mcangle_it 4.134 r_mcangle_other 4.133 r_scbond_it 3.482 r_scbond_other 3.48 r_mcbond_it 2.581 r_mcbond_other 2.566 r_angle_refined_deg 1.481 r_angle_other_deg 0.678 r_chiral_restr 0.069 r_gen_planes_refined 0.019 r_gen_planes_other 0.016 r_bond_refined_d 0.011 r_bond_other_d 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3060 Nucleic Acid Atoms Solvent Atoms 14 Heterogen Atoms 4
Software Software Software Name Purpose REFMAC refinement XDS data reduction SHELXDE phasing