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Human CEACAM6-CEACAM8 N-domain heterodimer complex
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 4WHC
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.5 295 PEG 2000 MME, NiSO4, Tris-HCl
Crystal Properties Matthews coefficient Solvent content 2.65 53.53
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 109.146 α = 90 b = 113.582 β = 90 c = 123.151 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2014-04-14 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 1.0 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.52 83.49 100 17.8 6.7 52367
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 4WHC 2.52 83.49 50295 1998 99.92 0.2064 0.2053 0.2112 0.2341 0.2434 RANDOM 29.103
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.04 -0.41 0.37
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.639 r_dihedral_angle_4_deg 22.671 r_dihedral_angle_3_deg 15.542 r_dihedral_angle_1_deg 7.295 r_angle_other_deg 2.254 r_angle_refined_deg 2.046 r_mcangle_it 1.441 r_mcbond_it 0.863 r_mcbond_other 0.863 r_chiral_restr 0.128
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.639 r_dihedral_angle_4_deg 22.671 r_dihedral_angle_3_deg 15.542 r_dihedral_angle_1_deg 7.295 r_angle_other_deg 2.254 r_angle_refined_deg 2.046 r_mcangle_it 1.441 r_mcbond_it 0.863 r_mcbond_other 0.863 r_chiral_restr 0.128 r_bond_refined_d 0.017 r_bond_other_d 0.013 r_gen_planes_refined 0.011 r_gen_planes_other 0.01
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 10178 Nucleic Acid Atoms Solvent Atoms 194 Heterogen Atoms 3
Software Software Software Name Purpose REFMAC refinement d*TREK data reduction PDB_EXTRACT data extraction DENZO data reduction SCALEPACK data scaling