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The crystal structure of hemagglutinin form A/chicken/New York/14677-13/1998 in complex with LSTa
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 MICROBATCH 293 0.2 M ammonium fluoride and 20% (w/v) PEG 3350
Crystal Properties Matthews coefficient Solvent content 2.81 56.21
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 254.967 α = 90 b = 134.779 β = 112.2 c = 122.622 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD 2009-03-20 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 22-BM 1.0 APS 22-BM
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.8 45.2 98.5 17 3.2 92840
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.8 45.2 88190 4650 98.47 0.22128 0.21957 0.2206 0.25402 0.2509 RANDOM 64.672
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.46 -0.42 0.39 0.31
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.59 r_dihedral_angle_4_deg 19.421 r_dihedral_angle_3_deg 18.073 r_long_range_B_refined 9.442 r_long_range_B_other 9.442 r_scangle_other 6.293 r_dihedral_angle_1_deg 6.089 r_mcangle_other 5.924 r_mcangle_it 5.922 r_scbond_it 3.876
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.59 r_dihedral_angle_4_deg 19.421 r_dihedral_angle_3_deg 18.073 r_long_range_B_refined 9.442 r_long_range_B_other 9.442 r_scangle_other 6.293 r_dihedral_angle_1_deg 6.089 r_mcangle_other 5.924 r_mcangle_it 5.922 r_scbond_it 3.876 r_scbond_other 3.876 r_mcbond_it 3.691 r_mcbond_other 3.685 r_angle_refined_deg 1.584 r_angle_other_deg 1.465 r_chiral_restr 0.091 r_bond_refined_d 0.012 r_bond_other_d 0.008 r_gen_planes_refined 0.008 r_gen_planes_other 0.006 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 23153 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 289
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling PHASER phasing