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Streptomcyes albus JA3453 oxazolomycin ketosynthase domain OzmN KS2
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6.5 289 0.1M Bis-TRIS HCl pH 6.5,
2M ammonium sulfate
Crystal Properties Matthews coefficient Solvent content 2.68 54.03
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 82.271 α = 90 b = 100.482 β = 90 c = 160.103 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2013-08-19 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.97915, 0.97929 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 50 99.7 0.113 0.124 0.049 6.5 6.4 90011 90011 -3 22
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.03 98.8 0.633 0.692 0.274 0.844 6.3 4403
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2 37.8 85849 4428 99.61 0.1605 0.1591 0.1716 0.1891 0.1989 RANDOM 26.936
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -2.28 -0.39 2.67
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.804 r_dihedral_angle_4_deg 18.313 r_dihedral_angle_3_deg 13.579 r_dihedral_angle_1_deg 6.324 r_mcangle_it 2.227 r_angle_refined_deg 1.545 r_mcbond_it 1.427 r_mcbond_other 1.427 r_angle_other_deg 0.806 r_chiral_restr 0.09
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.804 r_dihedral_angle_4_deg 18.313 r_dihedral_angle_3_deg 13.579 r_dihedral_angle_1_deg 6.324 r_mcangle_it 2.227 r_angle_refined_deg 1.545 r_mcbond_it 1.427 r_mcbond_other 1.427 r_angle_other_deg 0.806 r_chiral_restr 0.09 r_bond_refined_d 0.014 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8545 Nucleic Acid Atoms Solvent Atoms 561 Heterogen Atoms 46
Software Software Software Name Purpose HKL-3000 phasing HKL-3000 data scaling DM phasing SHELX phasing MLPHARE phasing Coot model building ARP model building WARP model building SOLVE phasing RESOLVE model building PDB_EXTRACT data extraction REFMAC refinement DENZO data reduction SCALEPACK data scaling