4WAM

H. influenzae beta-carbonic anhydrase variant W39V/G41A/P48S/A49P


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.52950.30 M sodium potassium phosphate, 12 mg/mL protein
Crystal Properties
Matthews coefficientSolvent content
2.1643.02

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 48.162α = 90
b = 130.259β = 90
c = 143.868γ = 90
Symmetry
Space GroupI 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray110CCDOXFORD RUBY CCD2010-05-28MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SEALED TUBEOXFORD DIFFRACTION ENHANCE ULTRA1.54

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.296.5695.30.1017.23.322403
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.22.2683.10.5211.72.1

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT2.296.5621239116395.320.235080.232240.28681RANDOM26.127
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.24-0.360.12
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.839
r_dihedral_angle_3_deg19.174
r_dihedral_angle_4_deg18.506
r_dihedral_angle_1_deg7.526
r_long_range_B_refined6.081
r_long_range_B_other5.869
r_scangle_other3.207
r_mcangle_it2.744
r_mcangle_other2.743
r_scbond_it1.989
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.839
r_dihedral_angle_3_deg19.174
r_dihedral_angle_4_deg18.506
r_dihedral_angle_1_deg7.526
r_long_range_B_refined6.081
r_long_range_B_other5.869
r_scangle_other3.207
r_mcangle_it2.744
r_mcangle_other2.743
r_scbond_it1.989
r_scbond_other1.886
r_angle_refined_deg1.793
r_mcbond_it1.631
r_mcbond_other1.631
r_angle_other_deg0.918
r_chiral_restr0.106
r_bond_refined_d0.016
r_gen_planes_refined0.007
r_bond_other_d0.002
r_gen_planes_other0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2835
Nucleic Acid Atoms
Solvent Atoms144
Heterogen Atoms22

Software

Software
Software NamePurpose
REFMACrefinement
PHASERphasing
Cootmodel building
SCALAdata scaling