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Crystallographic Structure of the Intramineral Protein Struthicalcin from Struthio camelus Eggshell
Crystallization Crystal Properties Matthews coefficient Solvent content 2.19 43.97
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 55.94 α = 90 b = 72.6 β = 90 c = 37.1 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALBA BEAMLINE XALOC ALBA XALOC
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.44 44.31 100 0.09 15.4 12.3 28309 2.2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 4.54 44.31 99 2.7 1.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.44 44.31 26876 1432 99.85 0.21381 0.21287 0.2221 0.23156 0.2349 RANDOM 28.801
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.09 -0.05 0.14
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.543 r_dihedral_angle_3_deg 17.071 r_dihedral_angle_4_deg 14.026 r_dihedral_angle_1_deg 7.232 r_mcangle_it 5.215 r_scbond_it 4.789 r_mcbond_it 3.36 r_mcbond_other 3.301 r_angle_refined_deg 1.748 r_angle_other_deg 0.95
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.543 r_dihedral_angle_3_deg 17.071 r_dihedral_angle_4_deg 14.026 r_dihedral_angle_1_deg 7.232 r_mcangle_it 5.215 r_scbond_it 4.789 r_mcbond_it 3.36 r_mcbond_other 3.301 r_angle_refined_deg 1.748 r_angle_other_deg 0.95 r_chiral_restr 0.131 r_bond_refined_d 0.021 r_gen_planes_refined 0.009 r_bond_other_d 0.006 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1068 Nucleic Acid Atoms Solvent Atoms 74 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling PHASER phasing