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Crystal structure of the S-layer protein SbsC domains 4 and 5
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details other POLYALA OF RSBSC AA31-844 STRUCTURE
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5.5 MG/ML IN 50MM TRIS/HCL PH 7.2 INDEX CONDITION NO.40 (0.01M CITRIC ACID PH 3.5, 3.0%(W/V) PEG 3350)
Crystal Properties Matthews coefficient Solvent content 3.5 63
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 110.367 α = 90 b = 110.367 β = 90 c = 87.143 γ = 90
Symmetry Space Group P 41 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD 2011-05-29 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06SA SLS X06SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.8 25 89 0.15 10.8 6.5 14641 2.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT POLYALA OF RSBSC AA31-844 STRUCTURE 2.8 24.93 13044 684 99.63 0.2262 0.223 0.2225 0.28636 0.2867 RANDOM 40.26
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.11 -0.11 0.23
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 43.581 r_dihedral_angle_3_deg 18.454 r_dihedral_angle_1_deg 7.03 r_mcangle_it 3.738 r_scbond_it 2.865 r_mcbond_it 2.261 r_angle_refined_deg 1.559 r_chiral_restr 0.09 r_bond_refined_d 0.011 r_gen_planes_refined 0.005
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 43.581 r_dihedral_angle_3_deg 18.454 r_dihedral_angle_1_deg 7.03 r_mcangle_it 3.738 r_scbond_it 2.865 r_mcbond_it 2.261 r_angle_refined_deg 1.559 r_chiral_restr 0.09 r_bond_refined_d 0.011 r_gen_planes_refined 0.005 r_bond_other_d r_angle_other_deg r_dihedral_angle_4_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2739 Nucleic Acid Atoms Solvent Atoms 59 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement XDS data reduction XDS data scaling PHASER phasing