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Crystal structure of human tankyrase 2 in complex with TA-21
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8.5 0.2 M LISO4, 0.1 M TRIS HCL, 22% PEG3350, PH 8.5
Crystal Properties Matthews coefficient Solvent content 2.5 50
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 90.99 α = 90 b = 98.53 β = 90 c = 119.8 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PIXEL TOROIDAL MIRRORS 2013-02-09 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I04-1 Diamond I04-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.7 30 99.8 0.11 13.7 6.8 59271 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.7 1.74 100 0.95 1.95 7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT NONE 1.7 29.95 56307 2964 99.81 0.17657 0.17514 0.1856 0.20362 0.2112 RANDOM 20.837
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.26 -1.38 1.12
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.235 r_dihedral_angle_4_deg 16.874 r_dihedral_angle_3_deg 12.512 r_dihedral_angle_1_deg 6.12 r_mcangle_it 2.012 r_scbond_it 1.879 r_angle_refined_deg 1.349 r_mcbond_it 1.265 r_mcbond_other 1.264 r_angle_other_deg 0.771
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.235 r_dihedral_angle_4_deg 16.874 r_dihedral_angle_3_deg 12.512 r_dihedral_angle_1_deg 6.12 r_mcangle_it 2.012 r_scbond_it 1.879 r_angle_refined_deg 1.349 r_mcbond_it 1.265 r_mcbond_other 1.264 r_angle_other_deg 0.771 r_chiral_restr 0.08 r_bond_refined_d 0.01 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3347 Nucleic Acid Atoms Solvent Atoms 552 Heterogen Atoms 64
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling