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Crystal structure of a pre-cleavage Mos1 transpososome
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 3HOS
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7 290 100 mM Ammonium acetate, 20 mM MgCl2, 50 mM Hepes pH 7.0, 5 % (w/v) PEG 8,000
Crystal Properties Matthews coefficient Solvent content 2.6 52.68
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 96.471 α = 90 b = 340.09 β = 90 c = 160.36 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 77 PIXEL PSI PILATUS 6M 2013-05-04 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I03 0.97625 Diamond I03
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.09 92.5 99.7 0.134 8.9 8 69135
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3.09 3.27 99.7 0.442 3.4 8.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 3HOS 3.09 29.75 48166 2441 98.63 0.2301 0.2284 0.224 0.2614 0.2609 RANDOM 107.443
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.11 -4.24 4.34
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.618 r_dihedral_angle_3_deg 20.914 r_dihedral_angle_4_deg 16.745 r_mcangle_it 7.851 r_dihedral_angle_1_deg 5.212 r_mcbond_it 4.779 r_mcbond_other 4.779 r_angle_refined_deg 0.969 r_angle_other_deg 0.943 r_chiral_restr 0.059
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.618 r_dihedral_angle_3_deg 20.914 r_dihedral_angle_4_deg 16.745 r_mcangle_it 7.851 r_dihedral_angle_1_deg 5.212 r_mcbond_it 4.779 r_mcbond_other 4.779 r_angle_refined_deg 0.969 r_angle_other_deg 0.943 r_chiral_restr 0.059 r_bond_refined_d 0.005 r_gen_planes_refined 0.004 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8575 Nucleic Acid Atoms 3447 Solvent Atoms 2 Heterogen Atoms 15
Software Software Software Name Purpose iMOSFLM data reduction SCALA data scaling PDB_EXTRACT data extraction PHASER phasing REFMAC refinement MOSFLM data reduction