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The Fk1 domain of FKBP51 in complex with iFit1
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 3O5P
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.5 297 25 % PEG-3350, 0.2 M NH4-acetate and 0.1 M HEPES-NaOH pH 7.5
Crystal Properties Matthews coefficient Solvent content 2.21 44.25
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 44.995 α = 90 b = 48.552 β = 90 c = 56.666 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2009-07-26 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID29 1.000 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Rrim I (All) Rpim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.399 44.995 99.8 0.058 0.058 0.068 0.025 20.5 7 25180 25180 11.745
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Rpim I (All) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.4 1.47 98.7 0.535 0.535 0.233 1.4 6.9 3589
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 3o5p 1.4 20 25101 1266 99.96 0.1526 0.1508 0.1508 0.1863 0.1858 RANDOM 14.175
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.77 -0.66 -0.11
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 27.466 r_dihedral_angle_3_deg 13.055 r_dihedral_angle_4_deg 8.132 r_dihedral_angle_1_deg 7.461 r_angle_refined_deg 2.601 r_angle_other_deg 0.969 r_chiral_restr 0.141 r_bond_refined_d 0.028 r_gen_planes_refined 0.014 r_bond_other_d 0.001
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 27.466 r_dihedral_angle_3_deg 13.055 r_dihedral_angle_4_deg 8.132 r_dihedral_angle_1_deg 7.461 r_angle_refined_deg 2.601 r_angle_other_deg 0.969 r_chiral_restr 0.141 r_bond_refined_d 0.028 r_gen_planes_refined 0.014 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 982 Nucleic Acid Atoms Solvent Atoms 194 Heterogen Atoms 58
Software Software Software Name Purpose SCALA data scaling MOLREP phasing PDB_EXTRACT data extraction REFMAC refinement XDS data reduction XSCALE data reduction