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High-resolution structure of TxtE in the absence of substrate
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 5.6 295 1.25 M Li2SO4, 0.5 M (NH4)2SO4
Crystal Properties Matthews coefficient Solvent content 3.27 62.38
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 65.696 α = 90 b = 79.436 β = 90 c = 112.355 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2013-12-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL12-2 0.9795 SSRL BL12-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Rrim I (All) Rpim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.18 64.862 94.9 0.048 0.054 0.024 13.9 4.9 182976 182976
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Rpim I (All) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.18 1.24 81.1 1.362 1.362 0.708 0.6 4.4 22565
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.18 64.86 182894 9227 94.65 0.1629 0.1625 0.1622 0.1711 0.1707 RANDOM 21.146
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.46 0.39 0.07
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.282 r_dihedral_angle_4_deg 19.048 r_dihedral_angle_3_deg 13.109 r_rigid_bond_restr 8.23 r_sphericity_free 7.062 r_sphericity_bonded 6.377 r_dihedral_angle_1_deg 5.579 r_scbond_it 3.022 r_angle_refined_deg 1.661 r_mcbond_it 1.398
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.282 r_dihedral_angle_4_deg 19.048 r_dihedral_angle_3_deg 13.109 r_rigid_bond_restr 8.23 r_sphericity_free 7.062 r_sphericity_bonded 6.377 r_dihedral_angle_1_deg 5.579 r_scbond_it 3.022 r_angle_refined_deg 1.661 r_mcbond_it 1.398 r_mcangle_it 1.374 r_chiral_restr 0.093 r_bond_refined_d 0.018 r_gen_planes_refined 0.012
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3014 Nucleic Acid Atoms Solvent Atoms 401 Heterogen Atoms 93
Software Software Software Name Purpose SCALA data scaling PDB_EXTRACT data extraction REFMAC refinement