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Cyrstal structure of SLIT-ROBO Rho GTPase-activating protein 2 fragment
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 6.25 277 2.35M Ammonium Sulphate; 0.1M MES, pH 6.25, VAPOR DIFFUSION, temperature 277K
Crystal Properties Matthews coefficient Solvent content 1.85 33.56
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 31.3 α = 90 b = 52.54 β = 90 c = 92.51 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL PSI PILATUS 6M 2013-02-17 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID29 0.976251 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.87 46.26 98 0.103 4.6 13161 12959 2 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.87 1.99 94
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.87 46.26 13161 12311 648 98.38 0.22 0.22299 0.22101 0.2349 0.25944 0.2569 RANDOM 33.982
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.84 1.11 -0.27
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.523 r_dihedral_angle_4_deg 18.838 r_dihedral_angle_3_deg 15.222 r_dihedral_angle_1_deg 7.079 r_long_range_B_refined 6.423 r_long_range_B_other 6.12 r_scangle_other 3.354 r_mcangle_it 2.914 r_mcangle_other 2.913 r_scbond_it 2.409
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.523 r_dihedral_angle_4_deg 18.838 r_dihedral_angle_3_deg 15.222 r_dihedral_angle_1_deg 7.079 r_long_range_B_refined 6.423 r_long_range_B_other 6.12 r_scangle_other 3.354 r_mcangle_it 2.914 r_mcangle_other 2.913 r_scbond_it 2.409 r_scbond_other 2.014 r_mcbond_it 1.755 r_mcbond_other 1.753 r_angle_refined_deg 1.562 r_angle_other_deg 1.005 r_chiral_restr 0.091 r_bond_refined_d 0.013 r_gen_planes_refined 0.008 r_gen_planes_other 0.005 r_bond_other_d 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1280 Nucleic Acid Atoms Solvent Atoms 71 Heterogen Atoms 15
Software Software Software Name Purpose EDNA data collection BALBES phasing REFMAC refinement XDS data reduction XDS data scaling