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Crystal Structure of IRAK-4
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 EVAPORATION 6.4 293 2.6 - 2.9 M ammonium sulfate, PH 6.4-7.9 , EVAPORATION, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.6 52.77
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 87.73 α = 90 b = 116.81 β = 90 c = 140.92 γ = 90
Symmetry Space Group I 2 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 63 CCD ADSC QUANTUM 315 2002-05-22 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 5.0.2 1.0 ALS 5.0.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 43.86 99.55 35067 2.4
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.2 99.55
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.2 30 35067 1861 99.55 0.23867 0.2357 0.2405 0.29575 0.2969 RANDOM 41.829
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -2.44 5.25 -2.81
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.569 r_dihedral_angle_4_deg 21.703 r_dihedral_angle_3_deg 16.7 r_long_range_B_other 6.929 r_long_range_B_refined 6.898 r_dihedral_angle_1_deg 6.224 r_scangle_other 4.414 r_mcangle_other 4.199 r_mcangle_it 4.185 r_scbond_it 2.679
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.569 r_dihedral_angle_4_deg 21.703 r_dihedral_angle_3_deg 16.7 r_long_range_B_other 6.929 r_long_range_B_refined 6.898 r_dihedral_angle_1_deg 6.224 r_scangle_other 4.414 r_mcangle_other 4.199 r_mcangle_it 4.185 r_scbond_it 2.679 r_scbond_other 2.673 r_mcbond_it 2.616 r_mcbond_other 2.616 r_angle_refined_deg 1.438 r_angle_other_deg 0.802 r_chiral_restr 0.077 r_bond_refined_d 0.01 r_gen_planes_refined 0.005 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4505 Nucleic Acid Atoms Solvent Atoms 150 Heterogen Atoms 68
Software Software Software Name Purpose BOS data collection PHASER phasing REFMAC refinement MOSFLM data reduction SCALA data scaling